The complete ITS (internal transcribed spacer) region coding the ITS1, the ITS2 and the 5.8S rDNA was amplified by polymerase chain reaction from two strains of Gilbertella persicaria, six strains in the Mucoraceae (Mucor piriformis, M. rouxii, M. circinelloides, Rhizomucor miehei, R. pusillus and R. tauricus) and four strains representing three species of the Choanephoraceae (Blakeslea trispora, Choanephora infundibulifera and Poitrasia circinans). Sequences of the amplified DNA fragments were determined and analysed. G. persicaria belongs to the monogeneric family (Gilbertellaceae), however, originally it was described as Choanephora persicaria. The goal of this study was to reveal the phylogenetic relationship among fungi belonging to Gilbertellaceae, Choanephoraceae and Mucoraceae. Our results support that the “intermediate” position of this family is between Choanephoraceae and Mucoraceae.
Arx, von, J. A. (1982) On Mucoraceae s. str. and other families of the Mucorales. Sydowia 35, 10-26.
'On Mucoraceae s. str. and other families of the Mucorales ' () 35 Sydowia : 31 -26 .
Benny, G. L. (1991) Gilbertellaceae, a new family of the Mucorales (Zygomycetes). Mycologia 83, 150-157.
'Gilbertellaceae, a new family of the Mucorales (Zygomycetes) ' () 83 Mycologia : 31 -157 .
Bruns, T. D., White, T. J., Taylor, J. W. (1991) Fungal molecular systematics. Annu. Rev. Ecol. System. 22, 525-564.
'Fungal molecular systematics ' () 22 Annu. Rev. Ecol. System. : 31 -564 .
Eddy, E. D. (1925) A storage rot of peaches caused by a new species of Choanephora. Phytopathology 15, 607-610.
'A storage rot of peaches caused by a new species of Choanephora ' () 15 Phytopathology : 31 -610 .
Felsenstein, J. (1993) PHYLIP. Phylogeny Inference Package. University of Washington, Seattle.
PHYLIP. Phylogeny Inference Package , ().
Hseu, R.-S., Wang, H. H., Wang, H. F., Moncalvo, J. M. (1996) Differentiation and grouping of isolates of the Ganoderma lucidum complex by random amplified DNA-PCR compared with grouping on the basis of internal transcribed spacer sequences. Appl. Environ. Microbiol. 62, 1354-1363.
'Differentiation and grouping of isolates of the Ganoderma lucidum complex by random amplified DNA-PCR compared with grouping on the basis of internal transcribed spacer sequences ' () 62 Appl. Environ. Microbiol. : 31 -1363 .
Johnson, J. (1999) Phylogenetic relationships within Lepiota sensu lato based on morphological and molecular data. Mycologia 91, 443-458.
'Phylogenetic relationships within Lepiota sensu lato based on morphological and molecular data ' () 91 Mycologia : 31 -458 .
Ginting, C., Zehr, E. I., Westcott, S. W. (1996) Inoculum sources and characterisation of isolates of Gilbertella persicaria from peach fruit in South Carolina. Plant Dis. 80, 1129-1134.
'Inoculum sources and characterisation of isolates of Gilbertella persicaria from peach fruit in South Carolina ' () 80 Plant Dis. : 31 -1134 .
Hawksworth, D. L., Sutton, B. C., Ainsworth, G. C. (1983) Ainsworth & Bisby's dictionary of the fungi. 7th Ed. Commonwealth Mycological Institute, Kew. 445.
Ainsworth & Bisby's dictionary of the fungi , () 445 .
Hesseltine, C. W. (1960) Gilbertella gen. nov. (Mucorales). Bull. Torrey Bot. Club. 87, 21-30.
'Gilbertella gen. nov. (Mucorales) ' () 87 Bull. Torrey Bot. Club. : 31 -30 .
Kimura, M. (1980) A simple method for estimating evolutionary rates of base substitute through comparative studies of nucleotide sequences. J. Mol. Evol. 16, 111-120.
'A simple method for estimating evolutionary rates of base substitute through comparative studies of nucleotide sequences ' () 16 J. Mol. Evol. : 31 -120 .
12. Kirk, P. M. (1984) A monograph of the Choanephoraceae. Mycol. Pap. 152, 1-61.
Leach, J., Finkelstein, D. B., Rambosek, J. A. (1986) Rapid miniprep of DNA from filamentous fungi. Fungal Genet. Newslett. 33, 32-33.
'Rapid miniprep of DNA from filamentous fungi ' () 33 Fungal Genet. Newslett. : 32 -33 .
Liu, G. Y., Tzean, S. S. (1997) Phylogeny of the genus Arthrobotrys and allied nematode-trapping fungi based on rDNA sequences. Mycologia 89, 876-884.
'Phylogeny of the genus Arthrobotrys and allied nematode-trapping fungi based on rDNA sequences ' () 89 Mycologia : 31 -884 .
O'Donnell, K. L., Lutzoni, F. M., Ward, T. J. Benny, G. L. (2001) Evolutionary relationships among mucoralean fungi (Zygomycota): Evidence for family polyphyly on a large scale. Mycologia 93, 286-296.
'Evolutionary relationships among mucoralean fungi (Zygomycota): Evidence for family polyphyly on a large scale ' () 93 Mycologia : 31 -296 .
Papp, T., Vágvölgyi, Cs., Kerényi, Z., Nagy, Á., Michailides, T. J. (1997) DNA amplification polymorphisms of the postharvest pathogen Mucor piriformis. Ant. van Leeuwenhoek 72, 167-173.
'DNA amplification polymorphisms of the postharvest pathogen Mucor piriformis ' () 72 Ant. van Leeuwenhoek : 31 -173 .
Saitou, N., Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenic trees. Mol. Biol. Evol. 4, 406-425.
'The neighbor-joining method: a new method for reconstructing phylogenic trees ' () 4 Mol. Biol. Evol. : 31 -425 .
Salazar, O., Schneider, J. H. M., Julián, M. C., Keijer, J., Rubio, V. (1999) Phylogenetic subgrouping of Rhizoctonia solani AG 2 isolates based on ribosomal ITS sequences. Mycologia 91, 459-467.
'Phylogenetic subgrouping of Rhizoctonia solani AG 2 isolates based on ribosomal ITS sequences ' () 91 Mycologia : 31 -467 .
Schipper, M. A. A. (1975) On Mucor mucedo, Mucor flavus and related species. Stud. Mycol. 10, 1-33.
'On Mucor mucedo, Mucor flavus and related species ' () 10 Stud. Mycol. : 31 -33 .
Schipper, M. A. A. (1978) On the genera Rhizomucor and Parasitella. Stud. Mycol. 17, 53-71.
'On the genera Rhizomucor and Parasitella ' () 17 Stud. Mycol. : 31 -71 .
Swofford, G. L., Olsen, G. J. (1990) Phylogenic reconstruction. In: Hillis, D. M. and Moritz, C. (eds) Molecular Systematics. Sinauer, Sunderland, Mass., USA, 411-501.
Molecular Systematics , ().
Thompson, J. D., Higgins, D. G., Gibson, T. J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucl. Acid Res. 22, 4673-4680.
'CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice ' () 22 Nucl. Acid Res. : 31 -4680 .
Mitchell, T. G., White, T. J., Taylor, J. W. (1992) Comparison of 5.8S ribosomal DNA sequences among the basidiomycetous yeast genera Cystofilobasidium, Filobasidium and Filobasidiella. J. Med. Vet. Mycol. 30, 207-218.
'Comparison of 5.8S ribosomal DNA sequences among the basidiomycetous yeast genera Cystofilobasidium, Filobasidium and Filobasidiella ' () 30 J. Med. Vet. Mycol. : 31 -218 .
O'Donnell, K. L., Ellis, J. J., Hesseltine, C. W., Hooper, G. R. (1977) Zygosporogenesis in Gilbertella persicaria. Can. J. Bot. 55, 662-675.
'Zygosporogenesis in Gilbertella persicaria ' () 55 Can. J. Bot. : 31 -675 .
Vágvölgyi, Cs., Vastag, M., Ács, K., Papp, T. (1999) Rhizomucor tauricus: a questionable species of the genus. Mycol. Res. 103, 1318-1322.
'Rhizomucor tauricus: a questionable species of the genus ' () 103 Mycol. Res. : 31 -1322 .
Vastag, M., Papp, T., Kasza, Zs., Vágvölgyi, Cs. (1998) Differentiation of Rhizomucor species by carbon source utilization and isoenzyme analysis. J. Clin. Microbiol. 36, 2153-2156.
'Differentiation of Rhizomucor species by carbon source utilization and isoenzyme analysis ' () 36 J. Clin. Microbiol. : 31 -2156 .
Voigt, K., Cigelnik, E., O'Donnell, K. (1999) Phylogeny and PCR identification of clinically important Zygomycetes based on nuclear ribosomal-DNA sequence data. J. Clin. Microbiol. 37(12), 3957-3964.
'Phylogeny and PCR identification of clinically important Zygomycetes based on nuclear ribosomal-DNA sequence data ' () 37 J. Clin. Microbiol. : 31 -3964 .
Voigt, K., Wöstemeyer, J. (2001) Phylogeny and origin of 82 zygomycetes from all 54 genera of the Mucorales and Mortierellales based on combined analysis of actin and translation elongation factor EF-1α genes. Gene 270, 113-120.
'Phylogeny and origin of 82 zygomycetes from all 54 genera of the Mucorales and Mortierellales based on combined analysis of actin and translation elongation factor EF-1α genes ' () 270 Gene : 31 -120 .
White, T. J., Bruns, T., Lee, S., Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal genes for phylogenetics. In: Innis, M. A., Gelfand, D. H., Sninsky, J. J. and White, T. J. (eds) PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego, California, USA, 315-322.
PCR Protocols: A Guide to Methods and Applications , ().