In 2005, a severe drought occurred in Portugal, with several reservoirs becoming dry in the southern region. A set of 20 Portuguese water bodies were analysed through denaturing gradient gel electrophoresis (16SrDNA-DGGE) and DNA sequencing to assess its bacterioplankton diversity under these particular conditions. Environmental parameters were determined to assess the trophic conditions of each water body. Most water bodies fell into the meso-to eutrophic and hypereutrophic state. In general, the levels for conductivity, pH and total suspended solids were higher than the average data from previous years. Dominant phylotypes belonged to Cyanobacteria, Actinobacteria Alphaproteobacteria, Betaproteobacteria and Bacteroidetes groups. Despite the geographic distance, common phylotypes could be recorded among water bodies. Bacteroidetes dominated at Sousa River and were related to high nutrient levels. Cyanobacteria dominated at Alentejo reservoirs and correlated with higher conductivity values. However, Actinobacteria showed ubiquitous phylotypes throughout several samples, suggesting its persistence over geographically distant water bodies. This study showed a clear deterioration of water quality, from a physico-chemical point of view; furthermore, dominance of Cyanobacteria and Actinobacteria in reservoirs used for drinking water supply were also detected, which may become a concerning issue. However, the most severe bacterial community composition variations between summer 2005 and others were mainly related to higher water residence times. Thus, along with the expected intensification of drought episodes, with severe effects particularly in Southern Europe, it is clearly predictable an intensification in risks for water quality maintenance and even Public Health.
Allgaier, M. and H. P. Grossart. 2006. Diversity and seasonal dynamics of Actinobacteria populations in four lakes in Northeastern Germany. Appl. Environ. Microbiol. 72: 3489–3497.
Grossart H. P. , 'Diversity and seasonal dynamics of Actinobacteria populations in four lakes in Northeastern Germany ' (2006 ) 72 Appl. Environ. Microbiol. : 3489 -3497 .
Andreazza, R., B. C. Okeke, S. Pieniz, L. Bortolon, M. R. Lambais and F. A. O. Camargo. 2011. Effects of Stimulation of Copper Bioleaching on Microbial Community in Vineyard Soil and Copper Mining Waste. Biol. Trace Elem. Res. DOI: 10.1007/s12011-12011-19213-12018.
Antunes, S. C., D. R. de Figueiredo, S. M. Marques, B. B. Castro, R. Pereira and F. Gonçalves. 2007. Evaluation of water column and sediment toxicity from an abandoned uranium mine using a battery of bioassays. Sci. Total Environ. 374: 252–259.
Gonçalves F. , 'Evaluation of water column and sediment toxicity from an abandoned uranium mine using a battery of bioassays ' (2007 ) 374 Sci. Total Environ. : 252 -259 .
APHA. 1995. Standard Methods for the Examination of Water and Wastewater. American Public Health Association, Washington, DC.
'', in Standard Methods for the Examination of Water and Wastewater , (1995 ) -.
Baptista, M. S. and M. T. Vasconcelos. 2006. Cyanobacteria metal interactions: Requirements, toxicity, and ecological implications. Crit. Rev. Microbiol. 32: 127–137.
Vasconcelos M. T. , 'Cyanobacteria metal interactions: Requirements, toxicity, and ecological implications ' (2006 ) 32 Crit. Rev. Microbiol. : 127 -137 .
Bobos, I., N. Durães and F. Noronha. 2006. Mineralogy and geochemistry of mill tailings impoundments from Algares (Aljustrel), Portugal: Implications for acid sulfate mine waters formation. J. Geochem. Explor. 88: 1–5.
Noronha F. , 'Mineralogy and geochemistry of mill tailings impoundments from Algares (Aljustrel), Portugal: Implications for acid sulfate mine waters formation ' (2006 ) 88 J. Geochem. Explor. : 1 -5 .
Bond, N., P. Lake and A. Arthington. 2008. The impacts of drought on freshwater ecosystems: an Australian perspective. Hydrobiologia 600: 3–16.
Arthington A. , 'The impacts of drought on freshwater ecosystems: an Australian perspective ' (2008 ) 600 Hydrobiologia : 3 -16 .
Brümmer, I. H. M., W. Fehr and I. Wagner-Döbler. 2000. Biofilm community structure in polluted rivers: Abundance of dominant phylogenetic groups over a complete annual cycle. Appl. Environ. Microbiol. 66: 3078–3082.
Wagner-Döbler I. , 'Biofilm community structure in polluted rivers: Abundance of dominant phylogenetic groups over a complete annual cycle ' (2000 ) 66 Appl. Environ. Microbiol. : 3078 -3082 .
Caetano, S., R. Miguel, P. Mendes, H. Galvão and A. Barbosa. 2001. Cyanobacteria blooms and cyanotoxin occurrence in the Guadiana (SE Portugal) — preliminary results. Ecotox. Environ. Restoration 4: 53–59.
Barbosa A. , 'Cyanobacteria blooms and cyanotoxin occurrence in the Guadiana (SE Portugal) — preliminary results ' (2001 ) 4 Ecotox. Environ. Restoration : 53 -59 .
Carvalho, F. P., J. M. Oliveira, I. Lopes and A. Batista. 2007. Radionuclides from past uranium mining in rivers of Portugal. J. Environ. Radioact. 98: 298–314.
Batista A. , 'Radionuclides from past uranium mining in rivers of Portugal ' (2007 ) 98 J. Environ. Radioact. : 298 -314 .
Castro, B. B., S. C. Antunes, R. Pereira, A. M. V. M. Soares and F. Gonçalves. 2005. Rotifer community structure in three shallow lakes: Seasonal fluctuations and explanatory factors. Hydrobiologia 543: 221–232.
Gonçalves F. , 'Rotifer community structure in three shallow lakes: Seasonal fluctuations and explanatory factors ' (2005 ) 543 Hydrobiologia : 221 -232 .
Charron, D. F., M. K. Thomas, D. Waltner-Toews, J. J. Aramini, T. Edge, R. A. Kent, A. R. Maarouf and J. Wilson. 2004. Vulnerability of waterborne diseases to climate change in Canada: A review. J. Toxicol. Environ. Health — Part A 67: 1667–1677.
Wilson J. , 'Vulnerability of waterborne diseases to climate change in Canada: A review ' (2004 ) 67 J. Toxicol. Environ. Health — Part A : 1667 -1677 .
Codd, G. A. 2000. Cyanobacterial toxins, the perception of water quality, and the prioritisation of eutrophication control. Ecol. Eng. 16: 51–60.
Codd G. A. , 'Cyanobacterial toxins, the perception of water quality, and the prioritisation of eutrophication control ' (2000 ) 16 Ecol. Eng. : 51 -60 .
de Figueiredo, D. R., U. M. Azeiteiro, S. M. Esteves, F. J. M. Gonçalves and M. J. Pereira. 2004. Microcystin-producing blooms — A serious global public health issue. Ecotox. Environ. Saf. 59: 151–163.
Pereira M. J. , 'Microcystin-producing blooms — A serious global public health issue ' (2004 ) 59 Ecotox. Environ. Saf. : 151 -163 .
de Figueiredo, D. R., M. J. Pereira and A. Correia. 2010. Seasonal modulation of bacterioplankton community at a temperate eutrophic shallow lake. World J. Microbiol. Biotechnol. 26: 1067–1077.
Correia A. , 'Seasonal modulation of bacterioplankton community at a temperate eutrophic shallow lake ' (2010 ) 26 World J. Microbiol. Biotechnol. : 1067 -1077 .
de Figueiredo, D. R., M. J. Pereira, A. Moura, L. Silva, S. Bárrios, F. Fonseca, I. Henriques and A. Correia. 2007. Bacterial community composition over a dry winter in meso- and eutrophic Portuguese water bodies. FEMS Microbiol. Ecol. 59: 638–650.
Correia A. , 'Bacterial community composition over a dry winter in meso- and eutrophic Portuguese water bodies ' (2007 ) 59 FEMS Microbiol. Ecol. : 638 -650 .
de Figueiredo, D. R., A. S. S. P. Reboleira, S. C. Antunes, N. Abrantes, U. Azeiteiro, F. Gonçalves and M. J. Pereira. 2006. The effect of environmental parameters and cyanobacterial blooms on phytoplankton dynamics of a Portuguese temperate lake. Hydrobiologia 568: 145–157.
Pereira M. J. , 'The effect of environmental parameters and cyanobacterial blooms on phytoplankton dynamics of a Portuguese temperate lake ' (2006 ) 568 Hydrobiologia : 145 -157 .
De Oliveira Araújo, F. 1995. Effects of cyanobacteria on drinking water and human health: An epidemiological study in Evora, Portugal. Assessing and Managing Health Risks from Drinking Water Contamination: Approaches and Applications (Proceedings of the Rome Symposium, September 1994) 233: 101–110.
Oliveira Araújo F. , 'Effects of cyanobacteria on drinking water and human health: An epidemiological study in Evora, Portugal ' (1995 ) 233 Assessing and Managing Health Risks from Drinking Water Contamination: Approaches and Applications (Proceedings of the Rome Symposium, September 1994) : 101 -110 .
De Wever, A., K. Muylaert, K. Van Der Gucht, S. Pirlot, C. Cocquyt, J. P. Descy, P. D. Plisnier and W. Vyverman. 2005. Bacterial community composition in Lake Tanganyika: vertical and horizontal heterogeneity. Appl. Environ. Microbiol. 71: 5029–5037.
Vyverman W. , 'Bacterial community composition in Lake Tanganyika: vertical and horizontal heterogeneity ' (2005 ) 71 Appl. Environ. Microbiol. : 5029 -5037 .
Dokulil, M. T. and K. Teubner. 2000. Cyanobacterial dominance in lakes. Hydrobiologia 438: 1–12.
Teubner K. , 'Cyanobacterial dominance in lakes ' (2000 ) 438 Hydrobiologia : 1 -12 .
Domingues, R. B., A. Barbosa and H. Galvão. 2005. Nutrients, light and phytoplankton succession in a temperate estuary (the Guadiana, south-western Iberia). Estuarine Coastal Shelf Sci. 64: 249–260.
Galvão H. , 'Nutrients, light and phytoplankton succession in a temperate estuary (the Guadiana, south-western Iberia) ' (2005 ) 64 Estuarine Coastal Shelf Sci. : 249 -260 .
Dorigo, U., L. Volatier and J. F. Humbert. 2005. Molecular approaches to the assessment of biodiversity in aquatic microbial communities. Water Res. 39: 2207–2218.
Humbert J. F. , 'Molecular approaches to the assessment of biodiversity in aquatic microbial communities ' (2005 ) 39 Water Res. : 2207 -2218 .
Eiler, A. and S. Bertilsson. 2004. Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes. Environ. Microbiol. 6: 1228–1243.
Bertilsson S. , 'Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes ' (2004 ) 6 Environ. Microbiol. : 1228 -1243 .
Glenn, T. C. 2011. Field guide to next-generation DNA sequencers. Mol Ecol Resources 11: 759–769.
Glenn T. C. , 'Field guide to next-generation DNA sequencers ' (2011 ) 11 Mol Ecol Resources : 759 -769 .
Greer, A., V. Ng and D. Fisman. 2008. Climate change and infectious diseases in North America: The road ahead. Can. Med. Assoc. J. 178: 715–722.
Fisman D. , 'Climate change and infectious diseases in North America: The road ahead ' (2008 ) 178 Can. Med. Assoc. J. : 715 -722 .
Jardillier, L., D. Boucher, S. Personnic, S. Jacquet, A. Thénot, D. Sargos, C. Amblard and D. Debroas. 2005. Relative importance of nutrients and mortality factors on prokaryotic community composition in two lakes of different trophic status: Microcosm experiments. FEMS Microbiol. Ecol. 53: 429–443.
Debroas D. , 'Relative importance of nutrients and mortality factors on prokaryotic community composition in two lakes of different trophic status: Microcosm experiments ' (2005 ) 53 FEMS Microbiol. Ecol. : 429 -443 .
Lyautey, E., B. Lacoste, L. Ten-Hage, J. L. Rols and F. Garabetian. 2005. Analysis of bacterial diversity in river biofilms using 16S rDNA PCR-DGGE: Methodological settings and fingerprints interpretation. Water Res. 39: 380–388.
Garabetian F. , 'Analysis of bacterial diversity in river biofilms using 16S rDNA PCR-DGGE: Methodological settings and fingerprints interpretation ' (2005 ) 39 Water Res. : 380 -388 .
Marzorati, M., L. Wittebolle, N. Boon, D. Daffonchio and W. Verstraete. 2008. How to get more out of molecular fingerprints: Practical tools for microbial ecology. Environ. Microbiol. 10: 1571–1581.
Verstraete W. , 'How to get more out of molecular fingerprints: Practical tools for microbial ecology ' (2008 ) 10 Environ. Microbiol. : 1571 -1581 .
Masciopinto, C., R. La Mantia, A. Carducci, B. Casini, A. Calvario and E. Jatta. 2007. Unsafe tap water in households supplied from groundwater in the Salento Region of Southern Italy. J. Water Health 5: 129–148.
Jatta E. , 'Unsafe tap water in households supplied from groundwater in the Salento Region of Southern Italy ' (2007 ) 5 J. Water Health : 129 -148 .
Monteiro, M. T., R. Oliveira and C. Vale. 1995. Metal stress on the plankton communities of Sado River (Portugal). Water Res. 29: 695–701.
Vale C. , 'Metal stress on the plankton communities of Sado River (Portugal) ' (1995 ) 29 Water Res. : 695 -701 .
Moreno, I., A. Cameán, M. J. Tavares, P. Pereira and S. Franca. 2003. Toxicity of cyanobacteria isolated from the Guadiana River. Aquat. Ecosys. Health Manage. 6: 409–413.
Franca S. , 'Toxicity of cyanobacteria isolated from the Guadiana River ' (2003 ) 6 Aquat. Ecosys. Health Manage. : 409 -413 .
Moreno, I., G. Repetto, E. Carballal, A. Gago and A. M. Cameán. 2005. Cyanobacteria and microcystins occurrence in the Guadiana River (SW Spain). Int. J. Environ. Anal. Chem. 85: 461–474.
Cameán A. M. , 'Cyanobacteria and microcystins occurrence in the Guadiana River (SW Spain) ' (2005 ) 85 Int. J. Environ. Anal. Chem. : 461 -474 .
Moreno, I. M., P. Pereira, S. Franca and A. Cameán. 2004. Toxic cyanobacteria strains isolated from blooms in the Guadiana River (southwestern Spain). Biol. Res. 37: 405–417.
Cameán A. , 'Toxic cyanobacteria strains isolated from blooms in the Guadiana River (southwestern Spain) ' (2004 ) 37 Biol. Res. : 405 -417 .
Muylaert, K., K. Van der Gucht, N. Vloemans, L. De Meester, M. Gillis and W. Vyverman. 2002. Relationship between bacterial community composition and bottom-up versus top-down variables in four eutrophic shallow lakes. Appl. Environ. Microbiol. 68: 4740–4750.
Vyverman W. , 'Relationship between bacterial community composition and bottom-up versus top-down variables in four eutrophic shallow lakes ' (2002 ) 68 Appl. Environ. Microbiol. : 4740 -4750 .
Muyzer, G., E. C. De Waal and A. G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59: 695–700.
Uitterlinden A. G. , 'Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA ' (1993 ) 59 Appl. Environ. Microbiol. : 695 -700 .
Page, R. D. M. 1996. Tree View: An application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12: 357–358.
Page R. D. M. , 'Tree View: An application to display phylogenetic trees on personal computers ' (1996 ) 12 Comput. Appl. Biosci. : 357 -358 .
Portillo, M. C. and J. M. Gonzalez. 2008. Statistical differences between relative quantitative molecular fingerprints from microbial communities. Antonie van Leeuwenhoek 1-7.
Pouria, S., A. De Andrade, J. Barbosa, R. L. Cavalcanti, V. T. S. Barreto, C. J. Ward, W. Preiser, G. K. Poon, G. H. Neild and G. A. Codd. 1998. Fatal microcystin intoxication in haemodialysis unit in Caruaru, Brazil. Lancet 352: 21–26.
Codd G. A. , 'Fatal microcystin intoxication in haemodialysis unit in Caruaru, Brazil ' (1998 ) 352 Lancet : 21 -26 .
Rocha, C., H. Galvão and A. Barbosa. 2002. Role of transient silicon limitation in the development of cyanobacteria blooms in the Guadiana estuary, south-western Iberia. Mar. Ecol. Prog. Ser. 228: 35–45.
Barbosa A. , 'Role of transient silicon limitation in the development of cyanobacteria blooms in the Guadiana estuary, south-western Iberia ' (2002 ) 228 Mar. Ecol. Prog. Ser. : 35 -45 .
Rodier, J. 1996. L’analyse de l’eau: Eaux Naturelles, Eaux Reìsiduaires, Eau de mer. Dunod, Paris.
Rodier J. , '', in L’analyse de l’eau: Eaux Naturelles, Eaux Reìsiduaires, Eau de mer , (1996 ) -.
Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406–425.
Nei M. , 'The neighbor-joining method: a new method for reconstructing phylogenetic trees ' (1987 ) 4 Mol. Biol. Evol. : 406 -425 .
Saker, M. L., I. C. G. Nogueira, V. M. Vasconcelos, B. A. Neilan, G. K. Eaglesham and P. Pereira. 2003. First report and toxicological assessment of the cyanobacterium Cylindrospermopsis raciborskii from Portuguese freshwaters. Ecotox. Environ. Saf. 55: 243–250.
Pereira P. , 'First report and toxicological assessment of the cyanobacterium Cylindrospermopsis raciborskii from Portuguese freshwaters ' (2003 ) 55 Ecotox. Environ. Saf. : 243 -250 .
Smith, J. L., G. L. Boyer and P. V. Zimba. 2008. A review of cyanobacterial odorous and bioactive metabolites: Impacts and management alternatives in aquaculture. Aquaculture 208: 5–20.
Zimba P. V. , 'A review of cyanobacterial odorous and bioactive metabolites: Impacts and management alternatives in aquaculture ' (2008 ) 208 Aquaculture : 5 -20 .
ter Braak, C. J. F. 1995. Data Analysis in Community and Landscape Ecology. Jongman, R. H. G., C. J. F. ter Braak, O. F. R. Tongeren (eds). Cambridge, UK: Cambridge University Press. pp. 91–173.
Braak C. J. F. , '', in Data Analysis in Community and Landscape Ecology , (1995 ) -.
Thompson, J. D., D. G. Higgins and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673–4680.
Gibson T. J. , 'CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice ' (1994 ) 22 Nucleic Acids Research : 4673 -4680 .
Valério, E., P. Pereira, M. L. Saker, S. Franca and R. Tenreiro. 2005. Molecular characterization of Cylindrospermopsis raciborskii strains isolated from Portuguese freshwaters. Harmful Algae 4: 1044–1052.
Tenreiro R. , 'Molecular characterization of Cylindrospermopsis raciborskii strains isolated from Portuguese freshwaters ' (2005 ) 4 Harmful Algae : 1044 -1052 .
Van Der Gucht, K., K. Cottenie, K. Muylaert, N. Vloemans, S. Cousin, S. Declerck, E. Jeppesen, J. M. Conde-Porcuna, K. Schwenk, G. Zwart, H. Degans, W. Vyverman and L. De Meester. 2007. The power of species sorting: Local factors drive bacterial community composition over a wide range of spatial scales. Proc. Nat. Acad. Sci. USA 104: 20404–20409.
Meester L. , 'The power of species sorting: Local factors drive bacterial community composition over a wide range of spatial scales ' (2007 ) 104 Proc. Nat. Acad. Sci. USA : 20404 -20409 .
Van der Gucht, K., K. Sabbe, L. De Meester, N. Vloemans, G. Zwart, M. Gillis and W. Vyverman. 2001. Contrasting bacterioplankton community composition and seasonal dynamics in two neighbouring hypertrophic freshwater lakes. Environ. Microbiol. 3: 680–690.
Vyverman W. , 'Contrasting bacterioplankton community composition and seasonal dynamics in two neighbouring hypertrophic freshwater lakes ' (2001 ) 3 Environ. Microbiol. : 680 -690 .
Van Der Gucht, K., T. Vandekerckhove, N. Vloemans, S. Cousin, K. Muylaert, K. Sabbe, M. Gillis, S. Declerk, L. De Meester and W. Vyverman. 2005. Characterization of bacterial communities in four freshwater lakes differing in nutrient load and food web structure. FEMS Microbiol. Ecol. 53: 205–220.
Vyverman W. , 'Characterization of bacterial communities in four freshwater lakes differing in nutrient load and food web structure ' (2005 ) 53 FEMS Microbiol. Ecol. : 205 -220 .
Vasconcelos, V.M. 1999. Cyanobacterial toxins in Portugal: Effects on aquatic animals and risk for human health. Braz. J. Med. Biol Res 32: 249–254.
Vasconcelos V.M. , 'Cyanobacterial toxins in Portugal: Effects on aquatic animals and risk for human health ' (1999 ) 32 Braz. J. Med. Biol Res : 249 -254 .
Vasconcelos, V. 2001. Toxic freshwater cyanobacteria and their toxins in Portugal. In: Chorus, I. (ed). Cyanotoxins — Occurrence, Causes, Consequences. Springer, Berlin. pp. 62–67.
Vasconcelos V. , '', in Cyanotoxins — Occurrence, Causes, Consequences , (2001 ) -.
Vasconcelos, V. M., K. Sivonen, W. R. Evans, W. W. Carmichael and M. Namikoshi. 1996. Hepatotoxic microcystin diversity in cyanobacterial blooms collected in Portuguese freshwaters. Water Res. 30: 2377–2384.
Namikoshi M. , 'Hepatotoxic microcystin diversity in cyanobacterial blooms collected in Portuguese freshwaters ' (1996 ) 30 Water Res. : 2377 -2384 .
Wiedner, C., J. Rücker, R. Brüggemann and B. Nixdorf. 2007. Climate change affects timing and size of populations of an invasive cyanobacterium in temperate regions. Oecologia 152: 473–484.
Nixdorf B. , 'Climate change affects timing and size of populations of an invasive cyanobacterium in temperate regions ' (2007 ) 152 Oecologia : 473 -484 .
Ye, L., M.-F. Shao, T. Zhang, A. H. Y. Tong and S. Lok. 2011. Analysis of the bacterial community in a laboratory-scale nitrification reactor and a wastewater treatment plant by 454-pyrosequencing. Water Res. 45: 4390–4398.
Lok S. , 'Analysis of the bacterial community in a laboratory-scale nitrification reactor and a wastewater treatment plant by 454-pyrosequencing ' (2011 ) 45 Water Res. : 4390 -4398 .
Zaitlin, B. and S. B. Watson. 2006. Actinomycetes in relation to taste and odour in drinking water: Myths, tenets and truths. Water Res. 40: 1741–1753.
Watson S. B. , 'Actinomycetes in relation to taste and odour in drinking water: Myths, tenets and truths ' (2006 ) 40 Water Res. : 1741 -1753 .