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Trichomoniasis, a common curable sexually transmitted infection caused by the protozoan Trichomonas vaginalis (TV), is usually asymptomatic. However, symptomatic women may experience vaginal discharge and/or vulvar irritation. This study evaluated cobas® TV/ Mycoplasma genitalium (MG) (Conformité Européene marking for in vitro diagnostic medical devices [CE-IVD]) against other nucleic acid amplification tests (NAATs) for detecting TV in female urogenital specimens. Matched de-identified specimens from 412 females were collected. cobas® TV/MG results were compared against a composite reference (CR) of 3 different NAATs for TV (Aptima TV, modified S-DiaMGTV™, and a laboratory-developed test). The overall TV prevalence rate was 6.2%, based on cobas® TV/MG results. Relative to the CR, cobas® TV/MG sensitivity/specificity for the specimen types were endocervical swabs (ES) 100%/99.2%, vaginal swabs (VS) 100%/99.7%, urine (U) 100%/99.7%, and cervical specimens in PreservCyt® solution (PC) 100%/99.5%. There was no significant statistical difference between clinician-collected and self-collected VS (p = 0.28). Correlation of cobas® TV/MG vs. Aptima TV demonstrated the following positive, negative, and overall percent agreements, respectively: ES 69.0%, 98.7%, and 96.6%; VS 88.9%, 99.5%, and 98.8%; U 100%, 100%, and 100%; and PC 95.5%, 99.0%, and 98.8%. Detection of TV with cobas® TV/MG for use on the cobas® 6800/8800 systems demonstrated excellent performance in female urogenital specimens (overall sensitivity/specificity of 100%/≥99.2%).

Open access

Abstract

The relationships between frugivorous animals and plants are of vital importance particularly in tropical forests. The way species interact and how they are organized within interaction networks could be determined by their ecological and morphological characteristics. This study evaluates the hypothesis that the topological position of species within an interaction network is determined by their degree of frugivory, body size, and abundance. Thus, we constructed the frugivory network between birds and plants in a rainforest fragment in northwestern Colombia. The position of the species within the network was calculated based on three centrality measures (degree, betweenness, and closeness), and its association with relative abundance, degree of frugivory, and body size of each bird species was evaluated by means of a generalized linear model. We found that the species that were most abundant and had the smallest body size had central positions in the interaction network. This pattern is contrary to what has been observed in pristine forests, where species with large body size are more important for network stability. Our results suggest that forest fragmentation modifies the roles of species within the network structure, in part, due to changes in the makeup of the original frugivore community. The information presented may be useful to evaluate the effects of the loss of species as a result of anthropic actions, with the aim of generating ecosystem restoration strategies.

Open access

Abstract

A growing number of ecological studies suggest that animal distributions are not only influenced by classical ecological features such as habitat availability, but also by the motion capacity of the studied animal. Here we analyse the diversity and density of two wintering raptor communities from Crete and Sicily, two large Mediterranean islands located along migratory flyways. We performed 611 and 1030 km of transects in Crete and Sicily respectively, examining the spatial distribution of raptors in relation to land use, topography, raptor species diversity and abundance. Our results show that community diversity and specific abundance are strictly related in accordance with the ‘More Individuals Hypothesis’. Comparing the two most common raptors, the density of the Eurasian kestrel was the highest in Sicily and that of the common buzzard in Crete. An overall positive effect of Eurasian kestrel density on that of the common buzzard was found in both islands, but higher in Crete. Our findings suggest that the distribution and density of the Eurasian kestrel, because of its higher movement ability, are less influenced by the presence of ecological barriers along potentially migratory flyways. We cannot exclude that higher inter specific competition with common buzzards in Crete might have pushed the smaller species to cross the Mediterranean Sea in order to overwinter in Africa.

Open access

Abstract

Biological invasion is a crucial problem in the world because of its negative consequences for protected areas. The degradation stage of vegetation might affect the success of invasion. One of the most abundant and threatening invasive species is the common milkweed (Asclepias syriaca L.) which has invaded already 23 countries of Europe and in several habitat types its further spreading is promoted by climate change. Pannonian sand grassland is one of the most threatened habitat by common milkweed invasion. Therefore, invasion in sand grassland vegetation is an important issue. However, the effects of the invasive plant in the open sand grassland are rather controversial. In order to clarify the existing contradictory results, the study was carried out in a strictly protected area, near Fülöpháza (Hungary) in a reserve core area in a UNESCO biosphere reserve. Microcoenological study was applied to determinate the fine-scale community characteristics of non-invaded and invaded stands in natural and seminatural vegetation and data were processed by Juhász-Nagy's information theory models. Shannon diversity of species combinations (compositional diversity) which describes the ways of the coexistence of species, and the number of realized species combinations were used for measuring beta diversity. Differences between stands were analyzed by two-way ANOVA. The maximum compositional diversity of species and main life-forms (annuals, perennials and cryptogams) did not differ significantly between the non-invaded and invaded stands. In contrast, significantly larger characteristic areas of compositional diversity were detected in the invaded stands. Based on these results, it could be concluded that diversity of species combinations did not change but those values have shifted to coarser scales in case of invaded stands. The direction of this change suggests a kind of impoverishment in the presence of Asclepias. Thus, it is worth mentioning from the invasion management point of view that protection of the habitats against disturbance is a more cost-effective and successful way than protection against the establishment or extirpation of invasive species, since disturbance facilitates the invasions throughout the impoverishment of the community.

Open access

Abstract

Functional responses measure the trophic interactions between species, taking into account the density and behavior of the interacting species. In predator-prey interactions, the prey preference of the predator and the antipredator behavior of the prey together determine the feeding rate of the predator and the survival rate of the prey. Consequently, the behavior dependent functional responses make it possible to establish dynamic ecological models providing insight, among others, into the coexistence of predator and prey species and the efficiency of agents in biological pest control. In this paper the derivation methods of functional responses are reviewed. Basically, there are three classes of such methods: heuristic, stochastic and deterministic ones. All of them can take account of the behavior of the predator and prey. There are three main stochastic methods for the derivation of functional responses: renewal theory, Markov chain and the Wald equality-based method. All these methods assume that during the foraging process the prey densities do not change, which provides a mathematical basis for heuristic derivation. There are two deterministic methods using differential equations. The first one also assumes that during the foraging process the prey densities do not change, while the second one does not use that assumption. These derivation methods are appropriate to handle the behavior dependent functional responses, which is essential in the derivation of ecological games, when the payoff of prey and predator depends on the strategies of the prey and predator at the same time.

Open access

Nowadays, multidrug-resistant bacteria are considered as an increasing serious threat to public health worldwide. Global and local surveillance data are helpful in the application of the most efficient antimicrobial agent in bacterial infections. In the current study, we aimed to analyze the activity of the previously cleared agent ceftolozane/tazobactam (C/T) in African and European multidrug-resistant Gram-negative bacteria. Susceptibility testing was performed on 147 extended-spectrum β-lactamase (107 Escherichia coli and 40 Klebsiella pneumoniae) and 103 carbapenemase-producing Gram-negative bacteria using Etest according to the European Committee on Antimicrobial Susceptibility Testing (EUCAST) clinical breakpoints. Among the extended-spectrum β-lactamase producing isolates, 91 Escherichia coli isolates (85%) and 23 Klebsiella pneumoniae isolates (57.5%) were susceptible towards C/T whereas out of the 103 carbapenemase-producing isolates 102 (99.0%) were C/T-resistant. C/T should be included in susceptibility testing to fairly administer this antimicrobial agent in infections caused by multidrug-resistant bacteria. It may be considered as a therapy option for infections caused by extended-spectrum β-lactamase-producing bacteria once susceptibility to this antimicrobial combination has been confirmed.

Open access

This paper presents the phytosociological description of a drained swamp community, Veratro albi-Fraxinetum angustifoliae, so far found only in the Nyírség at Nyírábrány “Kis-kőrises”, “Mogyorósi-erdő”; Vámospércs “Jónásrész-Kőrises”; and Vámospércs “Jónásrész-Buzita”. The habitat of the community is transitional between that of alder swamps (Fraxino pannonicae-Alnetum glutinosae), and hardwood riparian forests (Fraxino pannonicae-Ulmetum). The community is characterised by high proportions of character species of Alnion glutinosae and Molinion coerulei as well as Quercetea pubescentis-petraeae s. l. whereas character species of the order Fagetalia are almost completely absent. It hosts several rare, often threatened species, such as Angelica palustris, Ophioglossum vulgatum, Trollius europaeus and Veratrum album.

Open access

Intestinal carriage of multi-drug resistant (MDR) Gram-negative bacteria including Pseudomonas aeruginosa (Psae) constitutes a pivotal prerequisite for subsequent fatal endogenous infections in patients at risk. We here addressed whether fecal microbiota transplantation (FMT) could effectively combat MDR-Psae carriage. Therefore, secondary abiotic mice were challenged with MDR-Psae by gavage. One week later, mice were subjected to peroral FMT from either murine or human donors on 3 consecutive days. Irrespective of murine or human origin of fecal transplant, intestinal MDR-Psae loads decreased as early as 24 h after the initial FMT. Remarkably, the murine FMT could lower intestinal MDR-Psae burdens by approximately 4 log orders of magnitude within 1 week. In another intervention study, mice harboring a human gut microbiota were perorally challenged with MDR-Psae and subjected to murine FMT on 3 consecutive days, 1 week later. Strikingly, within 5 days, murine FMT resulted in lower loads and carrier rates of MDR-Psae in mice with a human gut microbiota. In conclusion, FMT might be a promising antibiotics-independent option to combat intestinal MDR-Psae carriage and thus prevent from future endogenous infections of patients at risk.

Open access

Introduction

It was previously shown that intracerebroventricular administration of pituitary adenylate cyclase-activating polypeptide (PACAP) prior to GnRH mobilization in proestrus prevents ovulation in rats. In this study, we examined whether PACAP given intranasally could influence luteinizing hormone (LH) and prolactin (PRL) surges and ovulation.

Methods

On the day of proestrus PACAP, β-cyclodextrin (modifier of blood–brain barrier) or PACAP + β-cyclodextrin was applied intranasally between 12:30 and 13:00. Blood samples were taken at 16:00, 18:00, and 20:00 for measuring plasma hormone levels. In the next morning, the expelled ova were counted. β-Cyclodextrin was also administered to male and diestrous female rats between 12:30 and 13:00 and blood was taken at 18:00.

Results

PACAP prevented LH and PRL surges and ovulation in about half of the rats, β-cyclodextrin alone more effectively prevented ovulation. When PACAP and β-cyclodextrin were administered together, more rats ovulated like when PACAP given alone. β-Cyclodextrin did not influence LH and PRL levels in diestrous females; however, in males, it significantly enhanced PRL level.

Discussion

Not only the intracerebroventricular, but the intranasal application of PACAP prevented ovulation. β-Cyclodextrin alone is more effective than PACAP and enhances PRL levels in male rats. PACAP and β-cyclodextrin given together weaken each other’s effect. β-Cyclodextrin, as excipient of various drugs, has to be used carefully in human medications.

Open access
European Journal of Microbiology and Immunology
Authors: Souba Diandé, Gisèle Badoum, Adjima Combary, Issaka Zombra, Tandaogo Saouadogo, Léon T. Sawadogo, Bayéma Nébié, Saïdou Gnanou, Adama Zigani, Seydou Mohamed Ouédraogo, Adama Diallo, Seydou Kaboré and Lassana Sangaré

Setting: A survey of the prevalence of drug-resistant tuberculosis (DR-TB) in new and previously treated patients (PTPs) was performed in Burkina Faso from 2016 to 2017.

Design: In this cross-sectional survey, a structured questionnaire was administered to eligible smear-positive patients in all 86 diagnostic and treatment centers of the country to collect their socio-demographic characteristics and medical histories. Their sputa were tested using the Mycobacterium tuberculosis/rifampicin (MTB/RIF) Xpert assay. Those which were found to be positive for TB and rifampicin-resistant were also tested with GenoType MTBDRplus2.0 and MTBDRsl2.0. Univariate and multivariate logistic regressions were performed to determine risk factors associated with rifampicin resistance.

Results: Of the 1140 smear-positive patients enrolled, 995 new and 145 PTPs were positive for MTB complex by Xpert. Of these, 2.0% (20/995, 95% confidence interval (CI): 1.1–2.9) of the new cases and 14.5% (95% CI: 14.2–20.2) of the PTPs were resistant to rifampicin; 83% of them has multidrug-resistant tuberculosis (MDR-TB). None were pre-extensively drug-resistant TB (pre-XDR-TB) or XDR-TB. Only the previous treatment was significantly associated with rifampicin resistance, p < 0.0001.

Conclusion: Similar to global trends, rifampicin resistance was significantly higher in patients with prior TB treatment (14.5%) than in naïve patients (2.0%). These percentages are slightly below the global averages, but nonetheless suggest the need for continued vigilance. Extending the use of Xpert testing should strengthen the surveillance of DR-TB in Burkina Faso.

Open access