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The effectiveness of dimethyl disulfide (DMDS) to control root-knot nematodes (Meloidogyne spp.) and weeds was tested for the first time in Hungary in two consecutive protected cucumber crops with application made only before the first crop. The treatments were Accolade EC (DMDS 94.1%) at 400 l/ha applied by driplines, Nemathorin 10 G (fosthiazate) at 30 kg/ha, and an untreated control. During the first cucumber cycle vigour-index, yield, root-gall index, Meloidogyne juveniles in the soil and germination of weeds were evaluated. All considered parameters were significantly improved by using DMDS compared respectively to the chemical standard and untreated control: (i) vigour-index of 7.0, 4.3 and 3.6; (ii) cumulative yield/sample of 45.1 kg, 30.9 kg, and 16.6 kg; root-gall index (RGI) of 1.2, 4.9, and 5.9; (iii) M. incognita J2/25 g soil of 0.25, 48.5 and 78.0, and (iv) number of weed seedlings/sample in the 20–30 cm soil profile of 1.1, 2.6, and 4.2. During the second cucumber crop, only root-gall index was evaluated. Results showed that a single DMDS treatment applied before the first crop had a prolonged beneficial effect on the following crop. In the second crop cycle, root gall indices were 5.58, 9.18, and 8.44 for DMDS treated plots, chemical control and untreated control, respectively.

Open access
Acta Alimentaria
Authors: Á. Tóth, E. Baka, Sz. Luzics, I. Bata-Vidács, I. Nagy, B. Bálint, R. Herczeg, F. Olasz, T. Wilk, T. Nagy, B. Kriszt, I. Nagy, and J. Kukolya

Thermobifidas are thermophilic, aerobic, lignocellulose decomposing actinomycetes. The Thermobifida genus includes four species: T. fusca, T. alba, T. cellulosilytica, and T. halotolerans. T. fusca YX is the far best characterized strain of this taxon and several cellulases and hemicellulases have been cloned from it for industrial purposes targeting paper industry, biofuel, and feed applications. Unfortunately, sequence data of such enzymes are almost exclusively restricted to this single species; however, we demonstrated earlier by zymography that other T. alba and T. cellulosilytica strains encode the same enzyme sets. Recently, the advances in whole genome sequencing by the use of next generation genomics platforms accelerated the selection process of valuable hydrolases from uncharacterized bacterial species for cloning purposes. For this purpose T. cellulosilytica TB100T type strain was chosen for de novo genome sequencing. We have assembled the genome of T. cellulosilytica strain TB100T into 168 contigs and 19 scaffolds, with reference length of 4 327 869 bps, 3 589 putative coding sequences, 53 tRNAs, and 4 rRNAs. The analysis of the annotated genome revealed the existence of 27 putative hydrolases belonging to 14 different glycoside hydrolase (GH) families. The investigation of identified, cloned, and heterologously multiple cellulases, mannanases, xylanases, and amylases may result in industrial applications beside gaining useful basic research related information.

Open access