Authors:M.J. Ansari, R. Kumar, K. Singh, and H.S. Dhaliwal
Diploid wheat T. monococcum L. is a model plant for wheat functional genomics. A soft glume mutant was identified during manual screening of EMS-treated M2 progenies of a T. monococcum accession pau14087. The seeds in the mature spike of the mutant could be easily threshed manually. The soft glume mutant with high sterility, tapering and broader spikes had also tougher rachis than the wild type parent. Genetic analysis of crosses of the mutant with wild type indicated that the mutant was monogenic recessive. To map the soft glume mutant, a mapping population was developed by crossing the soft glume mutant with wild Triticum boeoticum acc. pau 5088, having tough glumes and hard threshing. The soft glume mutant was mapped between SSR markers Xgwm473 and Xbarc69 on 7AmL chromosome of T. monococcum, with a genetic distance of 1.8 cM and 8.3 cM, respectively. The soft glum mutant mapped on 7AmL, being distinct from a previously mapped soft glume mutant in wheat, has been designated as sog2. The work on fine mapping of sog2 gene is in progress.
The UNESCO International Comparative Study on the Organization and Performance of Research Unists (ICSOPRU) has entered the period of drawing the theoretical and methodological conclusions from and starting the practical application of its results.Based on the experience of the 3 rounds of ICSOPRU, the national team of the Ukrainian SSR has attempted to broaden the scope and methodology of this international project. The main features of our studies are as follows.
The comparative analysis is performed among research units working or intending to work on common research topics.
The complex characteristics determining the level of competence of the research units in achieving their research aims is evaluated by criteria specific to the given problems.
In order to gain the above mentioned results, certain additional material had been included into The National Addendum and the national part of External Evaluations Questionnaire. Some additional software had also been developed.1–3
This paper concentrates on some methodological aspects of this approach and refers also to some problems of more intensive use of science and technology.
Authors:F.M. Zhao, Y. Tan, L.Y. Zheng, K. Zhou, G.H. He, Y.H. Ling, L.H. Zhang, and S.Z. Xu
Chromosome segment substitution lines (CSSLs) are powerful tools to combine naturally occurring genetic variants with favorable alleles in the same genetic backgrounds of elite cultivars. An elite CSSL Z322-1-10 was identified from advanced backcrosses between a japonica cultivar Nipponbare and an elite indica restorer Xihui 18 by SSR marker-assisted selection (MAS). The Z322-1-10 line carries five substitution segments distributed on chromosomes 1, 2, 5, 6 and 10 with an average length of 4.80 Mb. Spikilets per panicle, 1000-grain weight, grain length in the Z322-1-10 line are significantly higher than those in Nipponbare. Quantitative trait loci (QTLs) were identified and mapped for nine agronomic traits in an F3 population derived from the cross between Nipponbare and Z322-1-10 using the restricted maximum likelihood (REML) method in the HPMIXED procedure of SAS. We detected 13 QTLs whose effect ranging from 2.45% to 44.17% in terms of phenotypic variance explained. Of the 13 loci detected, three are major QTL (qGL1, qGW5-1 and qRLW5-1) and they explain 34.68%, 44.17% and 33.05% of the phenotypic variance. The qGL1 locus controls grain length with a typical Mendelian dominance inheritance of 3:1 ratio for long grain to short grain. The already cloned QTL qGW5-1 is linked with a minor QTL for grain width qGW5-2 (13.01%) in the same substitution segment. Similarly, the previously reported qRLW5-1 is also linked with a minor QTL qRLW5-2. Not only the study is important for fine mapping and cloning of the gene qGL1, but also has a great potential for molecular breeding.
Authors:B. Kumar, K.S. Hooda, R. Gogoi, V. Kumar, S. Kumar, A. Abhishek, P. Bhati, J.C. Sekhar, K.R. Yathish, V. Singh, A. Das, G. Mukri, E. Varghese, H. Kaur, V. Malik, and O.P. Yadav
Maydis leaf blight (MLB), a serious foliar fungal disease of maize, may cause up to 40% losses in yield. The present studies were undertaken to identify the stable sources of MLB resistance, its inheritance study, and testing of MLB resistance linked markers from diverse background in the Indian adapted tropical maize genotypes. A set of 112 inbred lines were screened under artificially created epiphytotics conditions at three hotspot locations. Analysis across multi-locations revealed significant effects of genotypes and environments, and non-significant effects due to genotypes × environment interaction on disease incidence. A total of 25 inbred lines with stable resistance were identified across multi-locations. Inheritance of resistance was studied in six F1s and two F2s of resistant and susceptible parents. The null hypothesis of segregation of resistance and susceptible for mono and digenic ratios in two F2 populations was rejected by Chi-square test. The non-significant differences among the reciprocal crosses depicted the complete control of nuclear genome for MLB resistance. Partial dominance in F1s and normal distribution pattern in F2s of resistant and susceptible parents suggested polygenic nature of MLB resistance. Correlation studies in F2 populations exhibited significant negative correlation between disease score and days to flowering. Five simple sequence repeats (SSRs) markers, found associated to MLB resistance in different studies were unable to differentiate amongst MLB resistance and susceptible parents in our study. This emphasizes the need of fine mapping for MLB resistance in Indian germplasm. The identified stable sources of resistance and information on inheritance study can be used further in strengthening of resistance breeding against MLB.
Authors:M. Mergoum, V. Harilal, P. Singh, T. Adhikari, A. Kumar, F. Ghavami, E. Elias, M. Alamri, and S. Kianian
Septoria tritici blotch (STB) caused by Mycosphaerella graminicola, is one of the most destructive foliar diseases of wheat (Triticum aestivum L.) especially in temperate and humid regions across the world. The susceptibility of recently released varieties, evolution of resistance to fungicides and increasing incidence of STB disease emphasizes the need to understand the genetics of resistance to this disease and to incorporate host resistance into adapted cultivars. This study aimed to decipher the genetics and map the resistance to STB using a recombinant inbred line (RIL) mapping population derived from ‘Steele-ND’ (susceptible parent) and ‘ND 735’ (resistant parent). The RILs were evaluated in three greenhouse experiments, using a North Dakota (ND) isolate of STB pathogen. The mean disease severity of parental genotypes, ‘ND 735’ (11.96%) and ‘Steele-ND’ (66.67%) showed significant differences (p < 0.05). The population segregated for STB and the frequency distribution of RILs indicated quantitative inheritance for resistance. The mean disease severity in RILs ranged from 0 to 71.55% with a mean of 21.98%. The genome map of this population was developed using diversity array technology (DArT) and simple sequence repeat (SSR) markers. The framework linkage map of this population was developed using 469 molecular markers. This map spanned a total distance of 1,789.3 cM and consisted of 17 linkage groups. QTL mapping using phenotypic data and the framework linkage maps detected three QTL through composite interval mapping. One QTL was consistently detected in all experiments on the long arm of chromosome 5B, and explained up to 10.2% phenotypic variation. The other two QTLs, detected in single environments, were mapped to 1D and 7A and explain 13% and 5.5% of the phenotypic variation, respectively. The map position of the consistent QTL on 5BL coincides with the map position of durable resistance gene Stb1 suggesting the importance of this region of ‘ND 735’ as a source of durable STB resistance for the wheat germplasm.
Authors:M. Golabadi, A. Arzani, and S. Mirmohammadi Maibody
Grain protein content (GPC) in durum wheat is a crucial determinant of pasta quality and as such is an important economic factor. This study was carried out to determine the microsatellite markers (SSRs) as associated with GPC in durum wheat grown under normal and moisture stress conditions. F3 and F4 population derived from 151 F2 individuals developed from a cross between Oste-Gata (drought tolerant) and Massara-1 (drought susceptible) genotypes, were used. The population was evaluated under four environmental conditions (two irrigation regimes in two growing seasons). The results of single marker regression analysis (SMA) revealed that 2, 4 and 10 markers to be associated with GPC, test weight (TW) and 1000 grain weight (TGW), respectively. These markers explained between 4.4 and 21.8% of the phenotypic variation in either environmental condition. The most significant marker observed for GPC was located on 5B chromosome near Xgwm408 under normal conditions and the other marker was observed on 1A, explaining about 15% of phenotypic variance. However, it was not recognized any marker related to GPC under drought stress conditions. Xgwm408 marker was coincident with the markers identified for TW, TGW and components of grain yield under drought stress conditions. In spite of 5B, the other chromosomes such as 2B and 3B were related to quantitative traits like TW and TGW. Composite interval mapping (CIM) identified 4 and 5 putative minor and major QTL for TW and TGW, respectively. Two QTL near Xbarc101 and Xbarc124 markers on 3B and 2B chromosome, explained up to 45.2 and 6% of phenotypic variations of TGW and TW, respectively.