Authors:S. Song, Y. Tao, L. Zhao, P. Liu and Y. Wu
Barley yellow dwarf virus-GAV (BYDV-GAV) is one of the most serious viruses on wheat in China. In this study, five BYDV-GAV isolates collected from five regions in Northwestern China were sequenced. The complete genome sequences generated in this study along with nine genome sequences of BYDV-GAV isolates available in GeneBank were compared and analyzed. The comparative analysis indicated that the complete genomes of BYDV-GAV showed a low level of genetic diversity with nucleotide sequence identities ranging between 97.0% and 99.7%, and the RNA-dependent RNA polymerase gene (ORF1 + ORF2) was the most variable within the complete genome. Phylogenetic analysis indicated that the BYDV-GAV isolates in Northwestern China could be divided into two groups. In addition, two potential recombination events were detected among the 14 BYDV-GAV isolates. This study provided a detailed description of molecular characterization of BYDV-GAV in Northwestern China based on the complete genome sequences, which increased the understanding of genetic diversity of barley yellow dwarf viruses.
Authors:B. Hu, Y. Song, L. Wang, Q. Zhang, J. Li, K. Wei, Y. Chen and L. Zhang
Electronic stopping power of 19F in Ni, Pd and Gd was measured and compared to Mstar and SRIM calculation as well as experimental results published in literature.
It turns out that the present electronic stopping power agrees reasonably well with them.
Authors:Q. Chen, J. Song, W.P. Du, L.Y. Xu, Y. Jiang, J. Zhang, M. Zhang and G.R. Yu
Chinese endemic wheat landraces possess unique morphological features and desirable traits, useful for wheat breeding. It is important to clarify the relationship among these landraces. In this study, 21 accessions of the four Chinese endemic wheat landrace species were investigated using single-copy genes encoding plastid Acetyl-CoA carboxylase (Acc-1) and 3-phosphoglycerate kinase (Pgk-1) in order to estimate their phylogenetic relationship. Phylogenetic trees were constructed using maximum parsimony (MP), maximum likelihood (ML) and Bayesian, and TCS network and gene flow values. The A and B genome sequences from the Pgk-1 loci indicated that three accessions of Triticum petropavlovskyi were clustered into the same subclade, and the T. aestivum ssp. tibetanum and the Sichuan white wheat accessions were grouped into a separate subclade. Based on the Acc-1 gene, T. aestivum ssp. tibetanum and T. aestivum ssp. yunnanense were grouped into one subclade in the A genome; the B genome from T. petropavlovskyi and T. aestivum ssp. tibetanum, and the Sichuan white wheat complex and T. aestivum ssp. tibetanum were grouped in the same clades. The D genome of T. aestivum ssp. yunnanense clustered with T. petropavlovskyi. Our findings suggested that (1) T. petropavlovskyi is distantly related to the Sichuan white wheat complex; (2) T. petropavlovskyi, T. aestivum ssp. tibetanum and T. aestivum ssp. yunnanense are closely related; (3) T. aestivum ssp. tibetanum is closely related to T. aestivum ssp. yunnanense and the Sichuan white wheat complex; and (4) T. aestivum ssp. tibetanum may be an ancestor of Chinese endemic wheat landraces.
Authors:N. Niu, Y.X. Bai, S. Liu, Q.D. Zhu, Y.L. Song, S.C. Ma, L.J. Ma, X.L. Wang, G.S. Zhang and J.W. Wang
Studies of the pollen abortion mechanism in thermo-sensitive male sterile lines may provide a strong foundation for breeding hybrid wheat and establishing a theoretical basis for marker-assisted selection. To investigate the cause of pollen abortion in Bainong thermo – sensitive male sterile (BNS) lines, we analyzed the properties of pollen grains, changes in the tapetum and microspores in different anther developmental stages, and the distribution and deposition of nutrient substances in microspores. We found that tapetum degraded in the early uninucleate stage in sterile BNS (S-BNS), which was earlier than that of fertile BNS (F-BNS) tapetum. Large amounts of insoluble polysaccharides, lipids, and proteins were deposited until the trinucleate pollen stage in the nutritive cells in F-BNS. At the binucleate stage, the vacuoles disappeared and pollen inclusion increased gradually. At the trinucleate stage, these nutrients would help pollen grains mature and participate in fertilization normally. Therefore, early degradation of the tapetum, which inhibits normal microspore development, and the limited content of nutrient substances in pollen may be the main factors responsible for male sterility in BNS lines.
Two lines, L-19-613 and L-19-626, were produced from the common wheat cultivar Longmai 19 (L-19) by six consecutive backcrosses using biochemical marker-assisted selection. L-19 (Glu-D1a, Glu-A3c/Gli-A1?; Gli-A1? is a gene coding for unnamed gliadin) and L-19-613 (Glu-D1d, Glu-A3c/Gli-A1?) formed a set of near-isogenic lines (NILs) for HMW-GS, while L-19-613 and L-19-626 (Glu-D1d, Glu-A3e/Gli-A1m) constituted another set of NILs for the LMW-GS/gliadins. The three L-19 NILs were grown in the wheat breeding nursery in 2007 and 2008. The field experiments were designed using the three-column contrast arrangement method with four replicates. The three lines were ranked as follows for measurements of gluten strength, which was determined by the gluten index, Zeleny sedimentation, the stability and breakdown time of the farinogram, the maximum resistance and area of the extensogram, and the P andWvalues of the alveogram: L-19-613 > L-19-626 > L-19. The parameters listed above were significantly different between lines at the 0.05 or 0.01 level. The Glu-D1 and Glu-A3/Gli-A1 loci had additive effects on the gluten index, Zeleny sedimentation, stability, breakdown time, maximum resistance, area, P and W values. Although genetic variation at the Glu-A3/Gli-A1 locus had a great influence on wheat quality, the genetic difference between Glu-D1d and Glu-D1a at the Glu-D1 locus was much larger than that of Glu-A3c/Gli-A1? and Glu-A3e/Gli-A1m at the Glu-A3/Gli-A1 locus. Glu-D1d had negative effects on the extensibility and the L value compared with Glu-D1a. In contrast, Glu-A3c/Gli-A1? had a positive effect on these traits compared with Glu-A3e/Gli-A1m.
Authors:S.F. Dai, X.F. Xue, Y.F. Wang, Y.L. Xie, Z.P. Song, D.Y. Xu, Z.J. Wen and Z.H. Yan
New high-molecular-weight glutenin (HMW glutenin) sequences isolated from six Psathyrostachys juncea accessions by thermal asymmetric interlaced PCR differ from previous sequences from this species. They showed novel modifications in all of the structural domains, with unique C-terminal residues, and their N-terminal lengths were the longest among the HMW glutenins reported to date. In their repetitive domains, there were three repeatable motif units: 13-residue [GYWH(/I/Y)YT(/Q)S(/T)VTSPQQ], hexapeptide (PGQGQQ), and tetrapeptide (ITVS). The 13-residue repeats were restricted to the current sequences, while the tetrapeptides were only shared by D-hordein and the current sequences. However, these sequences were not expressed as normal HMW glutenin proteins because an in-frame stop codon located in the C-termini interrupted the intact open reading frames. A phylogenetic analysis supported different origins of the P. juncea HMW glutenin sequences than that revealed by a previous study. The current sequences showed a close relationship with D-hordein but appeared to be more primitive.
Authors:H. X. Ma, B. Yan, Y. H. Ren, Y. Hu, Y. L. Guan, F. Q. Zhao, J. R. Song and R. Z. Hu
3,3-Dinitroazetidinium (DNAZ) salt of perchloric acid (DNAZ·HClO4) was prepared, it was characterized by the elemental analysis, IR, NMR, and a X-ray diffractometer. The thermal behavior and decomposition reaction kinetics of DNAZ·HClO4 were investigated under a non-isothermal condition by DSC and TG/DTG techniques. The results show that the thermal decomposition process of DNAZ·HClO4 has two mass loss stages. The kinetic model function in differential form, the value of apparent activation energy (Ea) and pre-exponential factor (A) of the exothermic decomposition reaction of DNAZ·HClO4 are f(α) = (1 − α)−1/2, 156.47 kJ mol−1, and 1015.12 s−1, respectively. The critical temperature of thermal explosion is 188.5 °C. The values of ΔS≠, ΔH≠, and ΔG≠of this reaction are 42.26 J mol−1 K−1, 154.44 kJ mol−1, and 135.42 kJ mol−1, respectively. The specific heat capacity of DNAZ·HClO4 was determined with a continuous Cp mode of microcalorimeter. Using the relationship between Cp and T and the thermal decomposition parameters, the time of the thermal decomposition from initiation to thermal explosion (adiabatic time-to-explosion) was evaluated as 14.2 s.
Authors:M.Y. Wang, Y.L. Song, S.X. Zhang, X.L. Zhao, J.W. Wang, N. Niu and G.S. Zhang
Physiological male sterility induced by the chemical hybridizing agent (CHA) overcomes problems of maintenance of sterile lines and restorers. However, the mechanism of sterility is unclear. The process of tapetum of CHA-treated ‘Xi’nong 2611’ at uninucleate, binucleate and trinucleate were compared with control to determine if tapetum varying differently during developmental stages. Tapetal degradation in CHA-treated ‘Xi’nong 2611’ began at late uninucleate stage, somewhat earlier than control plants. Cytological observations indicated that the gradual degradation of the tapetum in CHA-treated ‘Xi’nong 2611’ was initiated and terminated earlier than in the control. These findings implied that CHA-induced male sterility was related to abnormally early tapetal degradation. In order to indicate the role of the SKP1 gene in fertility/sterility in wheat, its expression was assessed in anthers at uninucleate, binucleate and trinucleate stages. SKP1 expression was reduced in the later developmental stages, and there was an obvious decrease from the uninucleate to trinucleate stages. Higher expression of the SKP1 gene occurred in ‘Xi’nong 2611’ compared to CHA-treated ‘Xi’nong 2611’. This implied that SKP1 gene expression was inhibited during the fertility transformation process and was related to transformation from fertility to sterility. Moreover, the results from this study suggest that SKP1 plays an essential role of conducting fertility in physiological male sterility.
Authors:S.F. Dai, D.Y. Xu, Z.J. Wen, Z.P. Song, H.X. Chen, H.Y Li, J.R. Li, L.Z. Kang and Z.H. Yan
A novel 4.0-kb Fy was sequenced and bacterially expressed. This gene, the largest y-type HMW-GS currently reported, is 4,032-bp long and encodes a mature protein with 1,321 amino acid (AA) residues. The 4.0-kb Fy shows novel modifications in all domains. In the N-terminal, it contains only 67 AA residues, as three short peptides are absent. In the repetitive domain, the undecapeptide RYYPSVTSPQQ is completely lost and the dodecapeptide GSYYPGQTSPQQ is partially absent. A novel motif unit, PGQQ, is present in addition to the two standard motif units PGQGQQ and GYYPTSPQQ. Besides, an extra cysteine residue also occurs in the middle of this domain. The large molecular mass of the 4.0-kb Fy is mainly due to the presence of an extra-long repetitive domain with 1,279 AA residues. The novel 4.0-kb Fy gene is of interest in HMW-GS gene evolution as well as to wheat quality improvement with regard to its longest repetitive domain length and extra cysteines residues.
Authors:N. Niu, Y. L. Song, F. Wei, H. M. Liu, S. M. Ma, H. Y. Zhao and G. S. Zhang
In this study, we employed electron microscopy to investigate the cytogenetic and embryologic mechanisms of parthenogenesis induced in the 1BL/1RS male sterile lines of wheat. Analysis of the root tips and acid polyacrylamide gel electrophoresis indicated that all of the male sterile lines and their maintainer lines were 1BL/1RS translocation lines, whereas the restorer lines were non-1BL/1RS translocation lines. Furthermore, the chromosomes of 1BL/1RS wheat lines with T. aestivum cytoplasm and Aegilops cytoplasm (include Ae. kotschyi, Ae. ventricosa, Ae. variabilis) paired abnormally at different rates during meiotic metaphase I (MMI). The translocated segment size of the 1RS chromosome and the specific nuclear–alloplasm interaction impaired the pairing of homologous chromosome in the background of the specific Aegilops cytoplasm at MMI. In addition, the frequency of abnormal chromosomal pairing was directly affected by the frequency of haploid production induced by parthenogenesis. The results of this study provide significant insights into the mechanism of parthenogenesis, which is probably due to the abnormal fertilization of synergid cells in alloplasmic 1BL/1RS wheat.